STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAD59876.1Thioredoxin reductase. (335 aa)    
Predicted Functional Partners:
GAD60036.1
Thioredoxin; Belongs to the thioredoxin family.
 0.990
GAD59239.1
Thioredoxin domain-containing protein EC-YbbN.
  
 0.955
GAD58103.1
Thioredoxin reductase.
  
  
 
0.915
GAD59318.1
Cysteine desulfurase, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
  0.901
GAD57773.1
Glutamate synthase [NADPH] large chain.
    
 0.897
selD
Selenide,water dikinase; Synthesizes selenophosphate from selenide and ATP.
     
 0.888
GAD60553.1
Cystathionine gamma-synthase.
   
 
 0.780
GAD59191.1
Hypothetical protein.
    
 0.723
GAD59543.1
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase.
   
 0.688
GAD60081.1
Thiol:disulfide oxidoreductase TlpA.
   
 0.688
Your Current Organism:
Brevundimonas abyssalis
NCBI taxonomy Id: 1391729
Other names: B. abyssalis TAR-001, Brevundimonas abyssalis TAR-001, Brevundimonas sp. TAR-001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.