STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAD60399.1Nitroreductase family protein. (224 aa)    
Predicted Functional Partners:
GAD60143.1
Siroheme synthase / precorrin-2 oxidase / sirohydrochlorin ferrochelatase / uroporphyrinogen-III methyltransferase.
    
 0.836
GAD58082.1
ABC-type multidrug transport system, permease component.
  
  
 0.706
GAD57972.1
NADH-FMN oxidoreductase.
  
 
 0.585
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
 
 0.581
GAD60398.1
Hypothetical protein.
       0.527
GAD59340.1
Riboflavin kinase; FMN adenylyltransferase; Belongs to the ribF family.
    
 0.526
GAD58394.1
2,4-dienoyl-CoA reductase [NADPH].
  
 
 0.524
GAD60402.1
Hypothetical protein.
       0.503
GAD60400.1
Phosphoglucomutase.
       0.495
GAD60401.1
Hypothetical protein.
       0.495
Your Current Organism:
Brevundimonas abyssalis
NCBI taxonomy Id: 1391729
Other names: B. abyssalis TAR-001, Brevundimonas abyssalis TAR-001, Brevundimonas sp. TAR-001
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.