STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000687915_02103Unannotated protein. (303 aa)    
Predicted Functional Partners:
GCA_000687915_02104
Unannotated protein.
 
    0.952
GCA_000687915_02102
Unannotated protein.
 
   0.918
GCA_000687915_02101
Unannotated protein.
 
     0.834
GCA_000687915_01948
Unannotated protein.
  
  
 
0.828
GCA_000687915_02041
Unannotated protein.
  
  
 
0.828
GCA_000687915_01022
Unannotated protein.
  
  
 
0.826
GCA_000687915_02650
Unannotated protein.
  
  
 
0.826
GCA_000687915_02651
Unannotated protein.
  
   0.740
GCA_000687915_00489
Unannotated protein.
 
 
 0.724
GCA_000687915_01021
Unannotated protein.
  
   0.683
Your Current Organism:
Flavimarina sp. HelI48
NCBI taxonomy Id: 1392488
Other names: F. sp. Hel_I_48, Flavimarina sp. Hel_I_48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.