STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000687915_02213Unannotated protein. (357 aa)    
Predicted Functional Partners:
GCA_000687915_01488
Unannotated protein.
  
 0.942
GCA_000687915_00792
Unannotated protein.
  
 
 0.920
GCA_000687915_03179
Unannotated protein.
  
 
 0.919
GCA_000687915_03180
Unannotated protein.
    
  0.887
GCA_000687915_02175
Unannotated protein.
   
 
 0.817
GCA_000687915_00233
Unannotated protein.
    
 0.773
GCA_000687915_02214
Unannotated protein.
 
     0.738
GCA_000687915_02215
Unannotated protein.
       0.673
GCA_000687915_02921
Unannotated protein.
  
 
 0.634
GCA_000687915_03175
Unannotated protein.
  
 
 0.611
Your Current Organism:
Flavimarina sp. HelI48
NCBI taxonomy Id: 1392488
Other names: F. sp. Hel_I_48, Flavimarina sp. Hel_I_48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.