STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000687915_02713Unannotated protein. (225 aa)    
Predicted Functional Partners:
GCA_000687915_02712
Unannotated protein.
 
     0.953
GCA_000687915_02711
Unannotated protein.
       0.800
GCA_000687915_02750
Unannotated protein.
  
     0.637
GCA_000687915_01885
Unannotated protein.
  
     0.602
GCA_000687915_02710
Unannotated protein.
       0.547
GCA_000687915_03368
Unannotated protein.
  
     0.510
GCA_000687915_01179
Unannotated protein.
  
     0.505
GCA_000687915_03233
Unannotated protein.
  
     0.453
GCA_000687915_03398
Unannotated protein.
  
     0.447
GCA_000687915_03312
Unannotated protein.
  
     0.429
Your Current Organism:
Flavimarina sp. HelI48
NCBI taxonomy Id: 1392488
Other names: F. sp. Hel_I_48, Flavimarina sp. Hel_I_48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.