STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000687915_03312Unannotated protein. (267 aa)    
Predicted Functional Partners:
GCA_000687915_03368
Unannotated protein.
  
     0.683
GCA_000687915_02456
Unannotated protein.
  
     0.660
GCA_000687915_00383
Unannotated protein.
 
     0.648
GCA_000687915_00382
Unannotated protein.
  
     0.646
GCA_000687915_00385
Unannotated protein.
 
     0.483
GCA_000687915_03656
Unannotated protein.
  
     0.472
GCA_000687915_00280
Unannotated protein.
  
     0.454
GCA_000687915_02996
Unannotated protein.
  
     0.442
GCA_000687915_02713
Unannotated protein.
  
     0.429
GCA_000687915_01923
Unannotated protein.
  
     0.424
Your Current Organism:
Flavimarina sp. HelI48
NCBI taxonomy Id: 1392488
Other names: F. sp. Hel_I_48, Flavimarina sp. Hel_I_48
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.