STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000733945_01456Unannotated protein. (398 aa)    
Predicted Functional Partners:
GCA_000733945_01556
Unannotated protein.
 
 
  0.954
GCA_000733945_02705
Unannotated protein.
  
 
 0.929
GCA_000733945_00266
Unannotated protein.
  
 
 0.902
GCA_000733945_03187
Unannotated protein.
     
 0.900
GCA_000733945_02793
Unannotated protein.
  
  
 
0.756
GCA_000733945_01455
Unannotated protein.
       0.752
GCA_000733945_02794
Unannotated protein.
  
  
 
0.742
GCA_000733945_01841
Unannotated protein.
 
 
 0.736
GCA_000733945_01844
Unannotated protein.
 
 
 0.608
GCA_000733945_01842
Unannotated protein.
  
 
 0.579
Your Current Organism:
Leeuwenhoekiella sp. MAR2009132
NCBI taxonomy Id: 1392489
Other names: L. sp. MAR_2009_132, Leeuwenhoekiella sp. MAR_2009_132
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.