STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000688335_00320Unannotated protein. (408 aa)    
Predicted Functional Partners:
GCA_000688335_00322
Unannotated protein.
 
     0.946
GCA_000688335_00321
Unannotated protein.
 
  
  0.877
GCA_000688335_02359
Unannotated protein.
 
     0.797
GCA_000688335_02370
Unannotated protein.
 
     0.781
GCA_000688335_02354
Unannotated protein.
 
     0.780
GCA_000688335_03292
Unannotated protein.
  
     0.772
GCA_000688335_00323
Unannotated protein.
       0.668
GCA_000688335_00325
Unannotated protein.
 
     0.665
GCA_000688335_00324
Unannotated protein.
       0.622
GCA_000688335_00277
Unannotated protein.
  
     0.439
Your Current Organism:
Sediminibacter sp. HelI10
NCBI taxonomy Id: 1392490
Other names: S. sp. Hel_I_10, Sediminibacter sp. Hel_I_10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.