STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000688335_01707Unannotated protein. (322 aa)    
Predicted Functional Partners:
GCA_000688335_02037
Unannotated protein.
 
      0.878
GCA_000688335_01708
Unannotated protein.
 
    0.678
GCA_000688335_00196
Unannotated protein.
  
  
 0.657
GCA_000688335_02880
Unannotated protein.
  
    0.649
GCA_000688335_01414
Unannotated protein.
 
   
 0.579
GCA_000688335_01578
Unannotated protein.
  
 
 0.576
GCA_000688335_01729
Unannotated protein.
 
 
 0.572
GCA_000688335_01510
Unannotated protein.
  
 
 0.554
GCA_000688335_00203
Unannotated protein.
  
  
 0.532
GCA_000688335_00564
Unannotated protein.
  
  
 0.502
Your Current Organism:
Sediminibacter sp. HelI10
NCBI taxonomy Id: 1392490
Other names: S. sp. Hel_I_10, Sediminibacter sp. Hel_I_10
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.