STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000688335_01897Unannotated protein. (366 aa)    
Predicted Functional Partners:
GCA_000688335_00845
Unannotated protein.
   
 0.903
GCA_000688335_03268
Unannotated protein.
   
 0.720
GCA_000688335_01692
Unannotated protein.
   
 0.702
GCA_000688335_01896
Unannotated protein.
 
   0.686
GCA_000688335_01180
Unannotated protein.
  
  
 0.646
GCA_000688335_00532
Unannotated protein.
   
 0.643
GCA_000688335_02398
Unannotated protein.
   
  0.586
GCA_000688335_03457
Unannotated protein.
   
  0.586
GCA_000688335_02691
Unannotated protein.
     
 0.575
GCA_000688335_01616
Unannotated protein.
   
 0.574
Your Current Organism:
Sediminibacter sp. HelI10
NCBI taxonomy Id: 1392490
Other names: S. sp. Hel_I_10, Sediminibacter sp. Hel_I_10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.