STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000688335_02033Unannotated protein. (410 aa)    
Predicted Functional Partners:
GCA_000688335_02034
Unannotated protein.
 0.997
GCA_000688335_02158
Unannotated protein.
 0.996
GCA_000688335_01616
Unannotated protein.
 
    
 0.867
GCA_000688335_00173
Unannotated protein.
 
 
 0.822
GCA_000688335_00845
Unannotated protein.
 
 
  
 0.809
GCA_000688335_00617
Unannotated protein.
   
 0.728
GCA_000688335_00843
Unannotated protein.
  
     0.587
GCA_000688335_02035
Unannotated protein.
  
  
 0.570
GCA_000688335_03381
Unannotated protein.
  
   
 0.570
GCA_000688335_01339
Unannotated protein.
  
 
 
 0.544
Your Current Organism:
Sediminibacter sp. HelI10
NCBI taxonomy Id: 1392490
Other names: S. sp. Hel_I_10, Sediminibacter sp. Hel_I_10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.