STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000688335_02481Unannotated protein. (194 aa)    
Predicted Functional Partners:
GCA_000688335_02479
Unannotated protein.
       0.773
GCA_000688335_02480
Unannotated protein.
       0.773
GCA_000688335_02482
Unannotated protein.
       0.737
GCA_000688335_02483
Unannotated protein.
       0.737
GCA_000688335_02484
Unannotated protein.
       0.737
GCA_000688335_02485
Unannotated protein.
       0.737
GCA_000688335_02486
Unannotated protein.
       0.737
GCA_000688335_02487
Unannotated protein.
       0.468
Your Current Organism:
Sediminibacter sp. HelI10
NCBI taxonomy Id: 1392490
Other names: S. sp. Hel_I_10, Sediminibacter sp. Hel_I_10
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.