STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000688335_03177Unannotated protein. (294 aa)    
Predicted Functional Partners:
GCA_000688335_03176
Unannotated protein.
 
     0.895
GCA_000688335_00611
Unannotated protein.
    
 
 0.832
GCA_000688335_03461
Unannotated protein.
    
 
 0.832
GCA_000688335_00889
Unannotated protein.
 
 
 
 0.771
GCA_000688335_02340
Unannotated protein.
  
     0.764
GCA_000688335_01920
Unannotated protein.
  
     0.747
GCA_000688335_02802
Unannotated protein.
  
     0.730
GCA_000688335_00717
Unannotated protein.
  
     0.707
GCA_000688335_02543
Unannotated protein.
  
     0.701
GCA_000688335_02780
Unannotated protein.
  
     0.696
Your Current Organism:
Sediminibacter sp. HelI10
NCBI taxonomy Id: 1392490
Other names: S. sp. Hel_I_10, Sediminibacter sp. Hel_I_10
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.