STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000688035_02770Unannotated protein. (480 aa)    
Predicted Functional Partners:
GCA_000688035_02150
Unannotated protein.
  
 
 0.827
GCA_000688035_02769
Unannotated protein.
       0.768
GCA_000688035_02768
Unannotated protein.
       0.722
GCA_000688035_02767
Unannotated protein.
       0.565
GCA_000688035_01596
Unannotated protein.
  
 
 0.556
GCA_000688035_00013
Unannotated protein.
   
 
 0.548
GCA_000688035_00988
Unannotated protein.
   
 
 0.548
GCA_000688035_02062
Unannotated protein.
  
 
 0.537
GCA_000688035_01132
Unannotated protein.
  
  0.519
GCA_000688035_01615
Unannotated protein.
  
  0.519
Your Current Organism:
Ruminococcaceae bacterium AE2021
NCBI taxonomy Id: 1392491
Other names: R. bacterium AE2021
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