STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000687955_02547Unannotated protein. (247 aa)    
Predicted Functional Partners:
GCA_000687955_02548
Unannotated protein.
 
     0.933
GCA_000687955_02549
Unannotated protein.
 
     0.681
GCA_000687955_02550
Unannotated protein.
       0.621
GCA_000687955_02551
Unannotated protein.
 
     0.559
GCA_000687955_02552
Unannotated protein.
 
     0.515
GCA_000687955_00990
Unannotated protein.
  
     0.496
GCA_000687955_02546
Unannotated protein.
       0.491
Your Current Organism:
Clostridioides mangenotii
NCBI taxonomy Id: 1392497
Other names: C. mangenotii LM2, Clostridioides mangenotii LM2, Clostridium mangenotii LM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.