STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS04222.13-oxo-5alpha-steroid 4-dehydrogenase. (566 aa)    
Predicted Functional Partners:
SDS43523.1
Succinate dehydrogenase subunit B.
  
 0.969
SDS43653.1
Succinate dehydrogenase subunit C; Manually curated.
  
 0.965
SDR75060.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.955
nuoC
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
  
 
 0.955
SDS04317.1
3-ketosteroid 9alpha-monooxygenase subunit B.
 
  
 0.949
SDS17128.1
Indolepyruvate ferredoxin oxidoreductase.
  
 0.934
SDS91020.1
Indolepyruvate ferredoxin oxidoreductase.
  
 0.934
SDS04158.1
3-oxosteroid 1-dehydrogenase.
 
  
 
0.905
SDS04113.1
3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9, 17-dione monooxygenase.
 
    0.902
SDS43598.1
Succinate dehydrogenase subunit D; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
  
 0.892
Your Current Organism:
Pseudomonas oryzae
NCBI taxonomy Id: 1392877
Other names: CGMCC 1.12417, KCTC 32247, P. oryzae, Pseudomonas sp. WM-3, strain WM-3
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