STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS64745.1Uncharacterized OsmC-related protein. (192 aa)    
Predicted Functional Partners:
SDS64697.1
Transcriptional regulator, AraC family with amidase-like domain.
 
     0.659
SDS64770.1
Erythromycin esterase homolog.
       0.535
SDT24355.1
3-methylcrotonyl-CoA carboxylase alpha subunit.
    
  0.516
SDS89013.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 
  
  0.490
sthA
NAD(P) transhydrogenase; Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
  
 0.458
SDS82978.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
  
  0.455
SDS18336.1
NADPH-glutathione reductase; Maintains high levels of reduced glutathione.
 
  
 0.452
SDT18559.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
  
  0.430
SDS86031.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
    
 0.408
SDS64817.1
Predicted PurR-regulated permease PerM.
  
    0.401
Your Current Organism:
Pseudomonas oryzae
NCBI taxonomy Id: 1392877
Other names: CGMCC 1.12417, KCTC 32247, P. oryzae, Pseudomonas sp. WM-3, strain WM-3
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.