STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCZ73377.1Putative RAMP superfamily protein probably involved in DNA repair; PFAM: RAMP superfamily. (211 aa)    
Predicted Functional Partners:
KCZ73376.1
Hypothetical protein.
  
 
 0.965
KCZ73375.1
HD domain-containing protein; PFAM: HD domain.
  
 
 0.917
KCZ73378.1
Putative RAMP superfamily protein probably involved in DNA repair; PFAM: RAMP superfamily.
       0.798
KCZ73379.1
Hypothetical protein.
       0.798
KCZ73380.1
Hypothetical protein.
       0.798
KCZ73381.1
PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, SSO1426 family.
      
0.798
KCZ73382.1
Putative RAMP superfamily protein probably involved in DNA repair; PFAM: RAMP superfamily.
       0.797
KCZ73383.1
Hypothetical protein.
       0.790
KCZ73384.1
Hypothetical protein.
       0.790
KCZ73374.1
PFAM: Uncharacterized conserved protein (DUF2276); TIGRFAM: CRISPR-associated endoribonuclease Cas6.
     
 0.577
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.