STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCZ73416.1Hypothetical protein; PFAM: HTH DNA binding domain; Fic/DOC family N-terminal; Fic/DOC family. (382 aa)    
Predicted Functional Partners:
dnaK
Chaperone protein DnaK; Acts as a chaperone.
   
 
 0.844
KCZ72212.1
Putative transcriptional regulator with HTH domain; PFAM: Divergent AAA domain; ATP-dependent DNA helicase recG C-terminal.
 
  
  0.447
KCZ70589.1
Putative transcriptional regulator with HTH domain; PFAM: ATP-dependent DNA helicase recG C-terminal; HsdM N-terminal domain.
 
  
  0.433
KCZ73417.1
PFAM: Cysteine-rich secretory protein family.
  
    0.430
KCZ73587.1
Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase; Type I restriction enzyme R protein N terminus (HSDR_N).
   
   0.410
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.