STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCZ72457.1Putative integral membrane protein; PFAM: VanZ like family. (183 aa)    
Predicted Functional Partners:
KCZ72455.1
PFAM: Protein of unknown function (DUF1616).
       0.798
KCZ72456.1
Hypothetical protein.
       0.774
KCZ72458.1
Uncharacterized Fe-S center protein; PFAM: 4Fe-4S binding domain; Domain of unknown function (DUF362).
       0.642
KCZ72459.1
PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase.
 
     0.536
KCZ72454.1
Archaeosortase C, PEF-CTERM variant; PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: exosortase/archaeosortase family protein; archaeosortase C, PEF-CTERM variant.
       0.419
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.