STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCZ72546.1Hypothetical protein. (52 aa)    
Predicted Functional Partners:
KCZ72544.1
PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; Belongs to the complex I 20 kDa subunit family.
       0.661
nuoA
NADH:ubiquinone oxidoreductase subunit 3 (chain A); PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3.
       0.661
KCZ72533.1
PFAM: F420H2 dehydrogenase subunit FpoO.
       0.571
fpoN
F420H2 dehydrogenase subunit N; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N.
       0.571
fpoM
PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M.
       0.571
fpoL
F420H2 dehydrogenase subunit L; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L.
       0.571
fpoK
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L.
       0.571
KCZ72538.1
Hypothetical protein.
       0.571
KCZ72539.1
NADH:ubiquinone oxidoreductase subunit 6 (chain J); PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6.
       0.571
KCZ72540.1
PFAM: 4Fe-4S dicluster domain; TIGRFAM: NADH-quinone oxidoreductase, chain I.
       0.571
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.