STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCZ72569.1Putative transcriptional regulator; PFAM: CBS domain; ParB-like nuclease domain; putative transcriptional regulator containing CBS domains. (273 aa)    
Predicted Functional Partners:
hom
PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain.
    
 0.790
KCZ70911.1
Cystathionine beta-lyase/cystathionine gamma-synthase; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: methionine gamma-lyase; O-succinylhomoserine sulfhydrylase.
    
 0.774
KCZ72026.1
RecF/RecN/SMC N-terminal domain-containing protein; PFAM: RecF/RecN/SMC N terminal domain.
  
 
 0.733
cobS
Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
    
  0.708
KCZ72991.1
Aspartate kinase; PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; Belongs to the aspartokinase family.
  
 
  0.691
pcn
DNA polymerase sliding clamp subunit; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication.
 
   
 0.656
KCZ73083.1
PFAM: Bacterial transcriptional repressor; Bacterial regulatory proteins, tetR family.
  
 
 
 0.563
KCZ72602.1
Putative membrane-associated Zn-dependent protease; PFAM: Peptidase family M50; PDZ domain.
  
  
 0.554
KCZ72570.1
Putative transcriptional regulator; PFAM: CBS domain; Winged helix-turn-helix transcription repressor, HrcA DNA-binding; putative transcriptional regulator, contains C-terminal CBS domains.
  
     0.548
KCZ70461.1
Putative coiled-coil protein.
  
  
  0.528
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
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