STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCZ72797.1Putative membrane protein; PFAM: Protein of unknown function (DUF996); Protein of unknown function (DUF1418). (194 aa)    
Predicted Functional Partners:
KCZ72796.1
Putative peroxiredoxin; PFAM: DsrE/DsrF-like family.
       0.557
KCZ72794.1
FeS cluster assembly scaffold protein NifU; PFAM: Pyridine nucleotide-disulphide oxidoreductase; NifU-like N terminal domain; TIGRFAM: FeS cluster assembly scaffold protein NifU, Clostridium type.
       0.520
iscS
PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS.
       0.520
KCZ72798.1
Hypothetical protein; PFAM: Carboxypeptidase regulatory-like domain.
       0.408
KCZ72799.1
Hypothetical protein; TIGRFAM: M6 family metalloprotease domain.
       0.408
KCZ72800.1
Periplasmic component of the Tol biopolymer transport system; PFAM: WD40-like Beta Propeller Repeat.
       0.408
KCZ72801.1
Hypothetical protein.
       0.408
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
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