STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCZ72830.1PFAM: Protein of unknown function (DUF354). (376 aa)    
Predicted Functional Partners:
KCZ72832.1
Hypothetical protein.
 
     0.916
KCZ72833.1
FemAB family; PFAM: Acetyltransferase (GNAT) domain.
 
     0.860
KCZ72834.1
FemAB family; PFAM: Acetyltransferase (GNAT) domain.
 
     0.854
KCZ72831.1
Coenzyme F390 synthetase.
       0.774
KCZ72835.1
Putative ATP-grasp enzyme; PFAM: ATP-grasp domain.
       0.752
KCZ72281.1
Hypothetical protein.
     0.729
KCZ72829.1
Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase.
 
     0.655
KCZ72282.1
Putative methicillin resistance protein; PFAM: Acetyltransferase (GNAT) domain.
 
     0.574
KCZ72826.1
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: Bacterial transferase hexapeptide (six repeats).
 
    0.566
KCZ72836.1
Putative ATP-grasp enzyme; PFAM: ATP-grasp domain.
       0.552
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.