STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCZ72926.1Hypothetical protein. (384 aa)    
Predicted Functional Partners:
KCZ72927.1
PIN domain-containing protein; PFAM: PIN domain.
       0.558
KCZ72928.1
PFAM: Antidote-toxin recognition MazE; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family.
       0.558
KCZ71883.1
Erythromycin esterase-like enzyme; PFAM: Erythromycin esterase.
  
     0.519
merA
Dihydrolipoamide dehydrogenase/mercuric reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; mercuric reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
       0.450
KCZ72930.1
SOS response transcriptional repressor, RecA-mediated autopeptidase; PFAM: LexA DNA binding domain; Alkylmercury lyase.
       0.434
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.