STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCZ71989.1PFAM: Uncharacterised protein family (UPF0150). (75 aa)    
Predicted Functional Partners:
KCZ70831.1
Putative periplasmic or secreted lipoprotein; PFAM: YcfA-like protein.
 
 
 
 0.782
KCZ71860.1
PFAM: YcfA-like protein.
   
 
 0.700
KCZ70733.1
Putative periplasmic or secreted lipoprotein; PFAM: YcfA-like protein.
   
 
 0.699
KCZ70830.1
PFAM: Uncharacterised protein family (UPF0150).
  
     0.582
KCZ71988.1
UbiD family decarboxylase; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylase.
       0.569
KCZ71985.1
Hypothetical protein.
       0.568
KCZ71986.1
Hypothetical protein.
       0.568
ubiX
Polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
       0.568
KCZ70900.1
PFAM: Uncharacterised protein family (UPF0150).
  
     0.553
KCZ71861.1
PFAM: Uncharacterised protein family (UPF0150).
  
     0.541
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.