STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCZ72287.1PFAM: Glycosyl transferase family 2. (315 aa)    
Predicted Functional Partners:
KCZ72518.1
Tetratricopeptide repeat protein; PFAM: TPR repeat.
  
 
 0.869
KCZ72286.1
Putative LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase.
 
  
 0.810
KCZ72289.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
    
 0.793
KCZ72290.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
    
 0.793
KCZ72288.1
Hypothetical protein.
       0.773
aglM
Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase.
  
 
 0.743
KCZ72291.1
PFAM: Glycosyl transferase family 2.
  
 
 0.721
ilvD
PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
 0.660
KCZ72281.1
Hypothetical protein.
  
 
 0.652
KCZ70637.1
Sucrose-phosphate phosphatase-like hydrolase, Archaeal; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: phosphoglycolate phosphatase, TA0175-type; sucrose-phosphate phosphatase subfamily.
 
  
 0.647
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.