STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCZ71725.1Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis C-terminal domain; Polysaccharide biosynthesis protein. (428 aa)    
Predicted Functional Partners:
KCZ71724.1
Putative membrane protein; PFAM: Protein of unknown function (DUF1616).
 
    0.808
KCZ71723.1
CAAX amino terminal protease family; PFAM: CAAX protease self-immunity.
 
    0.753
KCZ70513.1
PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylylransferase, long form.
 
  
 0.746
aglM
Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase.
  
  
 0.693
KCZ70515.1
dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase.
  
  
 0.693
KCZ70514.1
dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase.
  
  
 0.692
KCZ72809.1
Putative membrane protein; PFAM: Protein of unknown function (DUF1616).
 
    0.577
KCZ71155.1
Putative membrane protein; PFAM: VanZ like family; S-layer protein; Protein of unknown function (DUF1616).
 
    0.571
KCZ71732.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
 
   
 0.516
KCZ72156.1
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; PFAM: NMT1-like family.
 
     0.482
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
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