STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCZ71809.1Nucleotidyltransferase family protein; PFAM: Nucleotidyltransferase domain. (140 aa)    
Predicted Functional Partners:
KCZ71808.1
PFAM: Protein of unknown function DUF86.
   
   0.906
KCZ71810.1
Conserved repeat protein; PFAM: Translocon-associated protein beta (TRAPB); TIGRFAM: conserved repeat domain.
       0.773
KCZ71806.1
Hypothetical protein; PFAM: Prokaryotic homologs of the JAB domain.
       0.686
KCZ71807.1
Hypothetical protein.
       0.686
KCZ71805.1
Hypothetical protein.
       0.620
KCZ73132.1
PFAM: Protein of unknown function DUF86.
   
   0.602
KCZ73109.1
PFAM: Protein of unknown function DUF86.
   
   0.597
KCZ73319.1
PFAM: Protein of unknown function DUF86.
   
   0.597
KCZ71007.1
PFAM: Protein of unknown function DUF86.
   
   0.597
KCZ71061.1
PFAM: Protein of unknown function DUF86.
   
   0.597
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.