STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCZ71824.1Hypothetical protein. (461 aa)    
Predicted Functional Partners:
KCZ72310.1
PDK repeat-containing protein; PFAM: Putative collagen-binding domain of a collagenase; Cohesin domain; Protein of unknown function (DUF4038); PKD domain.
  
  
  0.782
KCZ72292.1
Nitrous oxidase accessory protein; PFAM: Right handed beta helix region; Fibronectin type III domain; TIGRFAM: parallel beta-helix repeat (two copies).
 
  
  0.750
KCZ71272.1
PDK repeat-containing protein; PFAM: PKD domain.
    
  0.748
KCZ73370.1
Parallel beta-helix repeat (two copies); PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies).
    
  0.664
KCZ72336.1
PFAM: emp24/gp25L/p24 family/GOLD.
  
     0.655
KCZ71823.1
Hypothetical protein; TIGRFAM: PGF-pre-PGF domain.
       0.636
KCZ73450.1
Nucleoside 2-deoxyribosyltransferase; Catalyzes the cleavage of the N-glycosidic bond of deoxyribonucleoside 5'-monophosphates to yield deoxyribose 5-phosphate and a purine or pyrimidine base; Belongs to the 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 family.
  
     0.559
trpG
Anthranilate synthase, component II; PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase.
   
 
  0.523
KCZ70329.1
Hypothetical protein.
  
     0.494
KCZ71811.1
PGF-CTERM archaeal protein-sorting signal; PFAM: von Willebrand factor type A domain; Vault protein inter-alpha-trypsin domain; TIGRFAM: PGF-CTERM archaeal protein-sorting signal.
 
   
 0.493
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
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