STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1-3Pyridine nucleotide-disulfide oxidoreductase; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). (1017 aa)    
Predicted Functional Partners:
mvhD
PFAM: Methyl-viologen-reducing hydrogenase, delta subunit.
 0.998
vhcD
PFAM: Methyl-viologen-reducing hydrogenase, delta subunit.
 0.998
hdrC
Hypothetical protein; PFAM: 4Fe-4S dicluster domain.
 
 0.994
fdhB
PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; 4Fe-4S dicluster domain; Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus.
 
 0.991
hdrB
Heterodisulfide reductase, subunit B; PFAM: Cysteine-rich domain.
 
 0.986
sudA
NADPH-dependent glutamate synthase, homotetrameric; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster; TIGRFAM: glutamate synthase (NADPH), homotetrameric.
   
 0.983
KCZ71093.1
PFAM: 4Fe-4S dicluster domain; TIGRFAM: CoB--CoM heterodisulfide reductase, subunit C.
 
 0.982
hdrB-3
PFAM: Cysteine-rich domain; TIGRFAM: CoB--CoM heterodisulfide reductase, subunit B.
 
 0.971
fdhA
NADH:ubiquinone oxidoreductase chain G-like protein; PFAM: Molybdopterin oxidoreductase Fe4S4 domain.
 
 
 0.970
KCZ70531.1
Hypothetical protein; PFAM: 4Fe-4S dicluster domain.
 
 0.958
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
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