STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCZ71638.1Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase; HsdM N-terminal domain. (515 aa)    
Predicted Functional Partners:
KCZ70877.1
Hypothetical protein.
 
 0.989
KCZ71637.1
PFAM: EcoEI R protein C-terminal; Type III restriction enzyme, res subunit.
 
 
 0.957
KCZ70586.1
PFAM: Type I restriction modification DNA specificity domain.
 
 0.940
KCZ71063.1
PFAM: Type I restriction modification DNA specificity domain.
 
 0.916
KCZ72788.1
PFAM: Type I restriction modification DNA specificity domain.
 
 0.908
KCZ72870.1
PFAM: Type I restriction modification DNA specificity domain.
 
 0.869
KCZ71639.1
PFAM: Protein of unknown function (DUF1016); Type I restriction modification DNA specificity domain.
     0.865
KCZ70599.1
PFAM: Type I restriction modification DNA specificity domain.
 
 
 0.861
KCZ70585.1
PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit.
 
 
 0.836
KCZ73516.1
PFAM: Type I restriction modification DNA specificity domain.
 
 0.826
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
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