STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCZ70904.1TIGRFAM: TIGR01210 family protein. (340 aa)    
Predicted Functional Partners:
guaAB
GMP synthase, glutamine-hydrolyzing, C-terminal domain or B subunit; Catalyzes the synthesis of GMP from XMP.
       0.818
KCZ72358.1
PFAM: PUA domain; Patch-forming domain C2 of tRNA-guanine transglycosylase; Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine family transglycosylase; uncharacterized domain 2.
 
     0.776
rpl44e
Ribosomal protein L44E; Binds to the 23S rRNA.
  
     0.678
KCZ73611.1
PFAM: Uncharacterised protein family (UPF0179); Belongs to the UPF0179 family.
  
     0.666
KCZ70461.1
Putative coiled-coil protein.
  
     0.665
KCZ72330.1
Hypothetical protein.
  
     0.660
KCZ70890.1
Hypothetical protein.
  
     0.654
KCZ70372.1
Putative transcriptional regulator; PFAM: Helix-turn-helix.
  
     0.654
KCZ70891.1
Hypothetical protein.
  
     0.641
KCZ71959.1
PFAM: PAC2 family; TIGRFAM: TIGR00162 family protein.
  
     0.638
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.