STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCZ71012.1Transposase; PFAM: Putative transposase DNA-binding domain. (446 aa)    
Predicted Functional Partners:
KCZ71014.1
PFAM: Nucleotidyltransferase domain.
       0.774
KCZ71013.1
Hypothetical protein.
       0.773
KCZ71015.1
PFAM: Protein of unknown function DUF86.
       0.773
KCZ71016.1
PFAM: Nucleotidyltransferase domain.
       0.773
KCZ71753.1
PFAM: Putative transposase DNA-binding domain; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.631
KCZ71018.1
PAPS reductase/FAD synthetase family protein; PFAM: Phosphoadenosine phosphosulfate reductase family.
 
     0.557
KCZ73245.1
Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase.
 
     0.546
KCZ71011.1
Pyruvate-formate lyase-activating enzyme; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Radical SAM superfamily; 4Fe-4S single cluster domain.
 
     0.532
KCZ70366.1
PFAM: Transposase IS200 like.
 
  
 0.497
KCZ71763.1
Transposase, IS605 OrfB family, central region; PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.481
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.