STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCZ71201.1Hypothetical protein; PFAM: Cytochrome c3. (313 aa)    
Predicted Functional Partners:
KCZ71206.1
Cytochrome b subunit of the bc complex; PFAM: Cytochrome b(C-terminal)/b6/petD.
 
     0.851
KCZ71204.1
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase; PFAM: Rieske [2Fe-2S] domain.
 
     0.849
petB
Cytochrome b subunit of the bc complex; PFAM: Cytochrome b(N-terminal)/b6/petB.
 
     0.781
KCZ71200.1
Hypothetical protein; PFAM: Cytochrome c3.
 
    
0.737
KCZ71202.1
Hypothetical protein.
       0.728
KCZ71203.1
Hypothetical protein.
       0.717
KCZ71207.1
Hypothetical protein.
       0.707
KCZ73534.1
DnaJ-class molecular chaperone with C-terminal Zn finger domain; PFAM: NapC/NirT cytochrome c family, N-terminal region; Cytochrome c3.
  
     0.685
KCZ73036.1
Hypothetical protein; PFAM: Cytochrome c554 and c-prime.
  
     0.663
KCZ73277.1
PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: formate dehydrogenase, gamma subunit.
  
     0.617
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.