STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCZ70459.1PFAM: Acylphosphatase. (95 aa)    
Predicted Functional Partners:
KCZ70460.1
Putative phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain.
       0.773
gatA
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
    
  0.743
KCZ73055.1
Hypothetical protein.
    
  0.740
KCZ73056.1
PFAM: CoA binding domain; ATP-grasp domain; Succinyl-CoA ligase like flavodoxin domain.
    
  0.740
C4
acetyl-CoA synthetase; PFAM: CoA binding domain; Acetyltransferase (GNAT) family; ATP-grasp domain; Succinyl-CoA ligase like flavodoxin domain; TIGRFAM: acetyl coenzyme A synthetase (ADP forming), alpha domain.
    
  0.740
KCZ70464.1
CoA-binding domain protein; PFAM: CoA binding domain; ATP-grasp domain; Succinyl-CoA ligase like flavodoxin domain; TIGRFAM: acetyl coenzyme A synthetase (ADP forming), alpha domain.
    
  0.740
gabD
PFAM: Aldehyde dehydrogenase family.
    
 0.736
acs
acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.726
KCZ72378.1
PFAM: ATP-grasp domain.
    
  0.722
KCZ72377.1
acetyl-CoA synthetase (ADP-forming) alpha subunit; PFAM: CoA binding domain; Succinyl-CoA ligase like flavodoxin domain; TIGRFAM: acetyl coenzyme A synthetase (ADP forming), alpha domain.
    
  0.717
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
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