STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCZ70350.1Nitrous oxide reductase; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; IMG reference gene:2515324226_SP. (136 aa)    
Predicted Functional Partners:
KCZ70348.1
Nitrous-oxide reductase; PFAM: Cytochrome C oxidase subunit II, periplasmic domain.
 
 
 0.960
KCZ71023.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component; PFAM: ABC-2 family transporter protein.
 
 
 0.924
KCZ71026.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component; PFAM: ABC-2 family transporter protein.
 
 
 0.915
KCZ70349.1
Hypothetical protein; PFAM: 4Fe-4S binding domain.
 
  
 0.892
serB
Nitrate reductase beta subunit; PFAM: 4Fe-4S dicluster domain.
 
  
 0.833
KCZ70344.1
Nitrate reductase alpha subunit; PFAM: Molybdopterin oxidoreductase.
 
   
 0.801
KCZ73061.1
PFAM: Nodulation protein S (NodS).
  
 
 0.742
KCZ72482.1
PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit.
  
 
 0.739
nodI
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter; TIGRFAM: ATP-binding ABC transporter family nodulation protein NodI.
  
 
 0.739
natA
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
 
 0.739
Your Current Organism:
Methanoperedens nitroreducens
NCBI taxonomy Id: 1392998
Other names: C. Methanoperedens nitroreducens, Candidatus Methanoperedens nitroreducens
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.