STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB33916.1KEGG: clo:HMPREF0868_0202 2.2e-44 isochorismatase family protein; Psort location: Cytoplasmic, score: 7.50. (176 aa)    
Predicted Functional Partners:
KXB34362.1
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
  
 
 0.942
KXB34365.1
KEGG: gva:HMPREF0424_1331 3.6e-101 transcriptional regulator, Sir2 family; K12410 NAD-dependent deacetylase; Psort location: Cytoplasmic, score: 7.50.
  
 0.897
KXB32915.1
Phosphorylase family 2; KEGG: ols:Olsu_1422 3.4e-128 Purine-nucleoside phosphorylase K03783; Psort location: Cytoplasmic, score: 7.50.
    
 0.870
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.672
KXB35558.1
Putative gluconate 5-dehydrogenase; KEGG: scc:Spico_1387 8.2e-63 3-oxoacyl-ACP reductase; K00046 gluconate 5-dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
 0.663
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
    
 0.598
KXB35095.1
Prolyl aminopeptidase; KEGG: ols:Olsu_1337 4.6e-101 proline-specific peptidase K01259; Belongs to the peptidase S33 family.
  
 0.587
KXB33814.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 1.3e-17 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: CytoplasmicMembrane, score: 9.55; Belongs to the CinA family.
  
 
 0.558
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.546
rpsL
Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
  
  
 0.530
Your Current Organism:
Atopobium deltae
NCBI taxonomy Id: 1393034
Other names: A. deltae, Atopobium deltae Cools et al. 2014, Atopobium sp. HHRM1715, CCUG 65171, LMG 27987, LMG:27987, strain HHRM1715
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