STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV32614.1HEAT repeat-containing protein. (393 aa)    
Predicted Functional Partners:
SFV32611.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
     0.950
SFV32608.1
Outer membrane protein, YaiO family.
 
     0.941
SFV32605.1
F5/8 type C domain-containing protein.
 
     0.892
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
   
 0.815
SFV32618.1
Response regulator receiver domain-containing protein.
 
     0.751
SFV28905.1
CarboxypepD_reg-like domain-containing protein.
  
     0.708
SFV35181.1
Protein of unknown function.
  
     0.663
SFV34481.1
Phytanoyl-CoA dioxygenase (PhyH).
  
     0.584
SFV28997.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
   
 
  0.530
SFV31772.1
2-oxoisovalerate dehydrogenase E1 component.
   
 
  0.530
Your Current Organism:
Crenotalea thermophila
NCBI taxonomy Id: 1393122
Other names: C. thermophila, Chitinophagaceae bacterium STH-1-Y1, Crenotalea thermophila Hanada et al. 2014, DSM 14807, JCM 11541, strain STH-1-Y1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.