STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV33320.1Biopolymer transport protein ExbD. (193 aa)    
Predicted Functional Partners:
SFV33322.1
Outer membrane transport energization protein TonB (TC 2.C.1.1.1); Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.985
SFV33316.1
Biopolymer transport protein ExbB.
 
 
 0.978
SFV28538.1
TonB family C-terminal domain-containing protein.
  
 
 0.834
SFV33602.1
Biopolymer transport protein ExbB.
  
 
 0.823
SFV29624.1
Phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1).
 
    0.797
SFV29628.1
Tetratricopeptide repeat-containing protein.
  
 
   0.791
SFV33318.1
Biopolymer transport protein ExbD/TolR.
 
   
0.765
SFV35279.1
Major Facilitator Superfamily protein.
  
 
   0.643
SFV34224.1
Fucose permease.
  
     0.637
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
 
 0.602
Your Current Organism:
Crenotalea thermophila
NCBI taxonomy Id: 1393122
Other names: C. thermophila, Chitinophagaceae bacterium STH-1-Y1, Crenotalea thermophila Hanada et al. 2014, DSM 14807, JCM 11541, strain STH-1-Y1
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