STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A371CMZ2Alpha-amylase. (584 aa)    
Predicted Functional Partners:
A0A371DN01
Glycoside hydrolase.
  
 
 0.865
A0A371D0F3
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.864
A0A371DNW3
Glycoside hydrolase family 13 protein.
   
 0.805
A0A371CPM5
Fe2OG dioxygenase domain-containing protein.
   
 
 0.768
A0A371CQW7
Alpha-amylase.
     
 0.752
A0A371DXR0
Alpha amylase.
     
 0.752
A0A371DK80
Endoplasmic reticulum protein.
   
 
  0.743
A0A371DCX2
Glucoamylase.
    
0.731
A0A371CWI1
Mitochondrial ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.669
A0A371DHM0
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.666
Your Current Organism:
Polyporus brumalis
NCBI taxonomy Id: 139420
Other names: P. brumalis
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