STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A371CUN0DEAD-domain-containing protein; Belongs to the DEAD box helicase family. (504 aa)    
Predicted Functional Partners:
A0A371CIH2
RNA-binding domain-containing protein.
   
 
 0.970
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.952
A0A371DMU4
Ribonuclease III.
   
 0.937
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.932
A0A371DKJ2
Nop-domain-containing protein.
  
 
 0.927
A0A371D346
Fibrillarin.
   
 
 0.925
A0A371DLU7
Eukaryotic rRNA processing.
   
 0.922
A0A371DKD3
Uncharacterized protein.
  
 0.912
A0A371DP92
Profilin; Belongs to the profilin family.
  
 0.912
A0A371DV11
NUC189-domain-containing protein.
   
 0.909
Your Current Organism:
Polyporus brumalis
NCBI taxonomy Id: 139420
Other names: P. brumalis
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