STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A371D2L2ARM repeat-containing protein. (688 aa)    
Predicted Functional Partners:
A0A371DSW3
60S ribosomal protein L5.
    
 
 0.947
A0A371CKU2
Brix-domain-containing protein.
   
 
 0.926
A0A371CLI7
Brix-domain-containing protein.
   
 
 0.926
A0A371CP26
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.922
A0A371D6W8
Brix-domain-containing protein.
   
    0.902
A0A371DMS0
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.890
A0A371DH82
Glutamate-rich WD repeat containing.
   
  
 0.887
A0A371D1N3
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
  
 0.865
A0A371DV11
NUC189-domain-containing protein.
   
    0.859
A0A371DRP4
NUC173-domain-containing protein.
   
  
 0.858
Your Current Organism:
Polyporus brumalis
NCBI taxonomy Id: 139420
Other names: P. brumalis
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