Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A371CKU2 | A0A371CP26 | Brix-domain-containing protein. | 60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. | 0.930 |
A0A371CKU2 | A0A371D1N3 | Brix-domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.986 |
A0A371CKU2 | A0A371D2L2 | Brix-domain-containing protein. | ARM repeat-containing protein. | 0.926 |
A0A371CKU2 | A0A371D6W8 | Brix-domain-containing protein. | Brix-domain-containing protein. | 0.941 |
A0A371CKU2 | A0A371DH82 | Brix-domain-containing protein. | Glutamate-rich WD repeat containing. | 0.866 |
A0A371CKU2 | A0A371DMS0 | Brix-domain-containing protein. | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | 0.990 |
A0A371CKU2 | A0A371DRP4 | Brix-domain-containing protein. | NUC173-domain-containing protein. | 0.799 |
A0A371CKU2 | A0A371DSW3 | Brix-domain-containing protein. | 60S ribosomal protein L5. | 0.944 |
A0A371CKU2 | A0A371DV11 | Brix-domain-containing protein. | NUC189-domain-containing protein. | 0.843 |
A0A371CLI7 | A0A371CP26 | Brix-domain-containing protein. | 60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. | 0.930 |
A0A371CLI7 | A0A371D1N3 | Brix-domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.986 |
A0A371CLI7 | A0A371D2L2 | Brix-domain-containing protein. | ARM repeat-containing protein. | 0.926 |
A0A371CLI7 | A0A371D6W8 | Brix-domain-containing protein. | Brix-domain-containing protein. | 0.941 |
A0A371CLI7 | A0A371DH82 | Brix-domain-containing protein. | Glutamate-rich WD repeat containing. | 0.866 |
A0A371CLI7 | A0A371DMS0 | Brix-domain-containing protein. | Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. | 0.990 |
A0A371CLI7 | A0A371DRP4 | Brix-domain-containing protein. | NUC173-domain-containing protein. | 0.799 |
A0A371CLI7 | A0A371DSW3 | Brix-domain-containing protein. | 60S ribosomal protein L5. | 0.944 |
A0A371CLI7 | A0A371DV11 | Brix-domain-containing protein. | NUC189-domain-containing protein. | 0.843 |
A0A371CP26 | A0A371CKU2 | 60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. | Brix-domain-containing protein. | 0.930 |
A0A371CP26 | A0A371CLI7 | 60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. | Brix-domain-containing protein. | 0.930 |
page 1 of 5