Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A371CUW1 | A0A371DA18 | Dihydrolipoyl dehydrogenase. | Ribosomal protein S5 domain 2-like protein. | 0.663 |
A0A371CUW1 | A0A371DGF4 | Dihydrolipoyl dehydrogenase. | Thymidylate synthase. | 0.826 |
A0A371CUW1 | A0A371DGH0 | Dihydrolipoyl dehydrogenase. | Thymidylate synthase/dCMP hydroxymethylase. | 0.826 |
A0A371CUW1 | A0A371DHQ7 | Dihydrolipoyl dehydrogenase. | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | 0.992 |
A0A371CUW1 | A0A371DLX5 | Dihydrolipoyl dehydrogenase. | Flavo protein. | 0.826 |
A0A371CUW1 | A0A371DTB9 | Dihydrolipoyl dehydrogenase. | D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.835 |
A0A371CX14 | A0A371DA18 | Uncharacterized protein. | Ribosomal protein S5 domain 2-like protein. | 0.580 |
A0A371CX14 | A0A371DED1 | Uncharacterized protein. | Thymidylate kinase. | 0.802 |
A0A371CX14 | A0A371DGF4 | Uncharacterized protein. | Thymidylate synthase. | 0.962 |
A0A371CX14 | A0A371DGH0 | Uncharacterized protein. | Thymidylate synthase/dCMP hydroxymethylase. | 0.962 |
A0A371CX14 | A0A371DLX5 | Uncharacterized protein. | Flavo protein. | 0.962 |
A0A371CX14 | A0A371DRY8 | Uncharacterized protein. | Inosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.825 |
A0A371DA18 | A0A371CUW1 | Ribosomal protein S5 domain 2-like protein. | Dihydrolipoyl dehydrogenase. | 0.663 |
A0A371DA18 | A0A371CX14 | Ribosomal protein S5 domain 2-like protein. | Uncharacterized protein. | 0.580 |
A0A371DA18 | A0A371DED1 | Ribosomal protein S5 domain 2-like protein. | Thymidylate kinase. | 0.719 |
A0A371DA18 | A0A371DGF4 | Ribosomal protein S5 domain 2-like protein. | Thymidylate synthase. | 0.683 |
A0A371DA18 | A0A371DGH0 | Ribosomal protein S5 domain 2-like protein. | Thymidylate synthase/dCMP hydroxymethylase. | 0.683 |
A0A371DA18 | A0A371DHQ7 | Ribosomal protein S5 domain 2-like protein. | Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. | 0.680 |
A0A371DA18 | A0A371DJT1 | Ribosomal protein S5 domain 2-like protein. | Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.650 |
A0A371DA18 | A0A371DLX5 | Ribosomal protein S5 domain 2-like protein. | Flavo protein. | 0.683 |
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