Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A371CR40 | A0A371D1M3 | U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. | RNA helicase. | 0.863 |
A0A371CR40 | A0A371DCA3 | U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. | Uncharacterized protein. | 0.797 |
A0A371CR40 | A0A371DGE8 | U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. | WD40 repeat-like protein. | 0.947 |
A0A371CR40 | A0A371DKH8 | U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. | Cell adhesion protein byn-1. | 0.876 |
A0A371CR40 | A0A371DKL8 | U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.992 |
A0A371CR40 | A0A371DM65 | U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. | Uncharacterized protein. | 0.984 |
A0A371CR40 | A0A371DMR4 | U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. | Nop14-like protein. | 0.998 |
A0A371CR40 | A0A371DSA6 | U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. | DEAD-domain-containing protein; Belongs to the DEAD box helicase family. | 0.995 |
A0A371CR40 | A0A371DTE8 | U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. | NUC153 domain-containing protein. | 0.796 |
A0A371CR40 | A0A371DTF6 | U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. | DUF947-domain-containing protein. | 0.995 |
A0A371D1M3 | A0A371CR40 | RNA helicase. | U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. | 0.863 |
A0A371D1M3 | A0A371DCA3 | RNA helicase. | Uncharacterized protein. | 0.712 |
A0A371D1M3 | A0A371DGE8 | RNA helicase. | WD40 repeat-like protein. | 0.989 |
A0A371D1M3 | A0A371DKH8 | RNA helicase. | Cell adhesion protein byn-1. | 0.961 |
A0A371D1M3 | A0A371DKL8 | RNA helicase. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.933 |
A0A371D1M3 | A0A371DM65 | RNA helicase. | Uncharacterized protein. | 0.986 |
A0A371D1M3 | A0A371DMR4 | RNA helicase. | Nop14-like protein. | 0.984 |
A0A371D1M3 | A0A371DSA6 | RNA helicase. | DEAD-domain-containing protein; Belongs to the DEAD box helicase family. | 0.752 |
A0A371D1M3 | A0A371DTE8 | RNA helicase. | NUC153 domain-containing protein. | 0.996 |
A0A371D1M3 | A0A371DTF6 | RNA helicase. | DUF947-domain-containing protein. | 0.990 |
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