Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A371CIG0 | A0A371CN81 | Urea carboxylase. | Citrate synthase; Belongs to the citrate synthase family. | 0.645 |
A0A371CIG0 | A0A371D1X7 | Urea carboxylase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.761 |
A0A371CIG0 | A0A371D4U8 | Urea carboxylase. | Uncharacterized protein. | 0.727 |
A0A371CIG0 | A0A371D5U0 | Urea carboxylase. | Malate synthase. | 0.877 |
A0A371CIG0 | A0A371DKQ2 | Urea carboxylase. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.707 |
A0A371CIG0 | A0A371DSZ5 | Urea carboxylase. | Acetoacyl-CoA synthetase. | 0.854 |
A0A371CIG0 | A0A371DUR3 | Urea carboxylase. | Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.843 |
A0A371CIG0 | A0A371DVH9 | Urea carboxylase. | Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. | 0.715 |
A0A371CIG0 | A0A371DVT1 | Urea carboxylase. | Citrate synthase; Belongs to the citrate synthase family. | 0.645 |
A0A371CIG0 | A0A371DXL7 | Urea carboxylase. | Citrate synthase; Belongs to the citrate synthase family. | 0.645 |
A0A371CN81 | A0A371CIG0 | Citrate synthase; Belongs to the citrate synthase family. | Urea carboxylase. | 0.645 |
A0A371CN81 | A0A371D1X7 | Citrate synthase; Belongs to the citrate synthase family. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.565 |
A0A371CN81 | A0A371D4U8 | Citrate synthase; Belongs to the citrate synthase family. | Uncharacterized protein. | 0.703 |
A0A371CN81 | A0A371D5U0 | Citrate synthase; Belongs to the citrate synthase family. | Malate synthase. | 0.939 |
A0A371CN81 | A0A371DKQ2 | Citrate synthase; Belongs to the citrate synthase family. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.861 |
A0A371CN81 | A0A371DSZ5 | Citrate synthase; Belongs to the citrate synthase family. | Acetoacyl-CoA synthetase. | 0.880 |
A0A371CN81 | A0A371DUR3 | Citrate synthase; Belongs to the citrate synthase family. | Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.871 |
A0A371CN81 | A0A371DVH9 | Citrate synthase; Belongs to the citrate synthase family. | Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. | 0.507 |
A0A371CN81 | A0A371DVT1 | Citrate synthase; Belongs to the citrate synthase family. | Citrate synthase; Belongs to the citrate synthase family. | 0.775 |
A0A371D1X7 | A0A371CIG0 | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | Urea carboxylase. | 0.761 |
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