STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A371DVI1Alkyl transferase; Belongs to the UPP synthase family. (266 aa)    
Predicted Functional Partners:
A0A371CQQ6
Uncharacterized protein.
   
 0.999
A0A371CYZ7
Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.895
A0A371DU96
Protein prenylyltransferase.
     
 0.865
A0A371CQC0
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
     
 0.864
A0A371DHC7
Terpenoid synthase.
  
 
 0.856
A0A371DQ47
Ribosome recycling factor.
  
  
 0.855
A0A371DQW1
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
   
 0.842
A0A371DTF3
Isopentenyldiphosphate isomerase.
  
 
 0.840
A0A371D4W9
Terpenoid synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.819
A0A371DPP3
Terpenoid synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.819
Your Current Organism:
Polyporus brumalis
NCBI taxonomy Id: 139420
Other names: P. brumalis
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