STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A371DYG5CNH domain-containing protein. (1047 aa)    
Predicted Functional Partners:
A0A371CQ60
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
   
 0.998
A0A371D375
Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family.
   
 0.998
A0A371DD21
Pep3_Vps18 domain-containing protein.
   
 0.998
A0A371DF86
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.998
A0A371DGC2
E3 ubiquitin-protein ligase PEP5.
   
 0.998
A0A371D6R8
Uncharacterized protein.
    
 
 0.974
A0A371CP01
Snare protein YKT6; Belongs to the synaptobrevin family.
    
 
 0.971
A0A371CLX8
Vesicle transport v-snare protein vti1.
    
 
 0.970
A0A371DV17
Ras-domain-containing protein.
    
 
 0.957
A0A371DBG2
t-SNARE; Belongs to the syntaxin family.
   
 
 0.943
Your Current Organism:
Polyporus brumalis
NCBI taxonomy Id: 139420
Other names: P. brumalis
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