STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHB41111.1HD protein; RAAC1_SR1_1_293. (194 aa)    
Predicted Functional Partners:
AHB41042.1
Hypothetical protein; RAAC1_SR1_1_224.
   
 
 0.999
AHB41515.1
Hypothetical protein; RAAC1_SR1_1_698.
  
  
  0.976
AHB40908.1
Hypothetical protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
  
  0.975
AHB41031.1
Pyruvate kinase; RAAC1_SR1_1_213; Belongs to the pyruvate kinase family.
  
 
 0.906
AHB41328.1
Hypothetical protein; RAAC1_SR1_1_510; Belongs to the pyruvate kinase family.
  
 
 0.906
AHB41474.1
Hypothetical protein; RAAC1_SR1_1_657; Belongs to the NDK family.
    
 0.906
AHB41560.1
Hypothetical protein; RAAC1_SR1_1_743; Belongs to the NDK family.
    
 0.906
AHB41733.1
Hypothetical protein; RAAC1_SR1_1_916; Belongs to the pyruvate kinase family.
  
 
 0.906
AHB41610.1
Hypothetical protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
 0.902
AHB41614.1
Hypothetical protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
    
  0.900
Your Current Organism:
candidate division SR1 bacterium RAAC1SR11
NCBI taxonomy Id: 1394709
Other names: c. division SR1 bacterium RAAC1_SR1_1, candidate division SR1 bacterium RAAC1_SR1_1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.