STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHB41372.1Putative formate transporter 1; RAAC1_SR1_1_555. (269 aa)    
Predicted Functional Partners:
AHB41374.1
Hypothetical protein; RAAC1_SR1_1_557.
 
  
 0.915
AHB41373.1
Pyruvate formate-lyase 1-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.
    
 0.865
AHB41371.1
Hypothetical protein; RAAC1_SR1_1_554.
       0.561
AHB41375.1
Hypothetical protein; RAAC1_SR1_1_558.
       0.474
Your Current Organism:
candidate division SR1 bacterium RAAC1SR11
NCBI taxonomy Id: 1394709
Other names: c. division SR1 bacterium RAAC1_SR1_1, candidate division SR1 bacterium RAAC1_SR1_1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.